Introduction to R for bioinformatics

Yustinus Maladan, S. Si., M. Si

Course Overview

This online workshop introduces R programming for bioinformatics, equipping participants with essential skills for analyzing biological data. Designed for students, researchers, and professionals in the life sciences, the course covers fundamental R programming concepts and their applications in bioinformatics. The workshop begins with an overview of R and its significance in biological research, followed by core programming concepts such as data structures, functions, and scripting. Participants will be introduced to Bioconductor , a powerful R-based framework for analyzing genomic data, with a focus on sequence analysis. Additionally, the course covers data visualization techniques to help interpret biological datasets effectively. A hands-on session will provide guided coding exercises, including a warm-up in R, biological sequence analysis, and parsing sequence files such as FASTA and GenBank. By the end of the workshop, participants will have a solid foundation in R for bioinformatics and be able to perform essential data analysis tasks. No prior programming experience is required. Join us to explore the power of R in bioinformatics! This online workshop introduces R programming for bioinformatics, equipping participants with essential skills for analyzing biological data. Designed for students, researchers, and professionals in the life sciences, the course covers fundamental R programming concepts and their applications in bioinformatics. The workshop begins with an overview of R and its significance in biological research, followed by core programming concepts such as data structures, functions, and scripting. Participants will be introduced to Bioconductor , a powerful R-based framework for analyzing genomic data, with a focus on sequence analysis. Additionally, the course covers data visualization techniques to help interpret biological datasets effectively. A hands-on session will provide guided coding exercises, including a warm-up in R, biological sequence analysis, and parsing sequence files such as FASTA and GenBank. By the end of the workshop, participants will have a solid foundation in R for bioinformatics and be able to perform essential data analysis tasks. No prior programming experience is required. Join us to explore the power of R in bioinformatics! Introduction to R & Bioinformatics Basics of R Programming Introduction to Bioconductor & Sequence Analysis Data Analysis & Visualization in R Case Study Hands-on: R Coding Warm-Up, Biological Sequence Analysis with R, Parsing and Analyzing Sequence Files

Sub-topics

  • 1.
    Introduction to R & Bioinformatics

  • 2.
    Basics of R Programming

  • 3.
    Introduction to Bioconductor & Sequence Analysis

  • 4.
    Data Analysis & Visualization in R

  • 5.
    Case Study

  • 6.
    Hands-on: R Coding Warm-Up, Biological Sequence Analysis with R, Parsing and Analyzing Sequence Files

Course Components

Introduction to R & Bioinformatics
Basics of R Programming
Introduction to Bioconductor & Sequence Analysis
Data Analysis & Visualization in R
Case Study
Hands-on: R Coding Warm-Up
Biological Sequence Analysis with R
Parsing and Analyzing Sequence Files